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Rare actinomycetes represent an underexploited source of new bioactive compounds. Here, we report the use of a targeted metabologenomic approach to identify piperazyl compounds in the rare actinomycete Lentzea flaviverrucosa DSM 44664. These efforts to identify molecules that incorporate piperazate building blocks resulted in the discovery and structural elucidation of two dimeric biaryl-cyclohexapeptides, petrichorins A and B. Petrichorin B is a symmetric homodimer similar to the known compound chloptosin, but petrichorin A is unique among known piperazyl cyclopeptides because it is an asymmetric heterodimer. Due to the structural complexity of petrichorin A, solving its structure required a combination of several standard chemical methods plus in silico modeling, strain mutagenesis, and solving the structure of its biosynthetic intermediate petrichorin C for confident assignment. Furthermore, we found that the piperazyl cyclopeptides comprising each half of the petrichorin A heterodimer are made via two distinct nonribosomal peptide synthetase (NRPS) assembly lines, and the responsible NRPS enzymes are encoded within a contiguous biosynthetic supercluster on the L. flaviverrucosa chromosome. Requiring promiscuous cytochrome p450 crosslinking events for asymmetric and symmetric biaryl production, petrichorins A and B exhibited potent in vitro activity against A2780 human ovarian cancer, HT1080 fibrosarcoma, PC3 human prostate cancer, and Jurkat human T lymphocyte cell lines with IC 50 values at low nM levels. Cyclic piperazyl peptides and their crosslinked derivatives are interesting drug leads, and our findings highlight the potential for heterodimeric bicyclic peptides such as petrichorin A for inclusion in future pharmaceutical design and discovery programs.more » « less
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Abstract This study documents the presence of ice in stratocumulus clouds with cloud top temperatures (CTT) > −5 °C in the cold sector of extratropical cyclones over the Southern Ocean (SO) during ten SO Clouds, Radiation, Aerosol Transport Experimental Study (SOCRATES) research flights. Case studies are presented showing ice signatures within clouds when CTT were between −2 and −5°C, evidenced in Doppler radar radial velocity changes observed during high‐altitude flight legs as ice particles melted across the 0°C isotherm. Ice on these legs was found to contribute to precipitation 3.8% of the time from clouds with −5°C < CTT <0°C. Clouds observed with a distinct melting level on high‐altitude flight legs overall had greater cloud depths, tops with higher reflectivities, and higher linear depolarization ratios, compared to clouds without a melting level. In situ flight legs were also analyzed when Himawari‐8 CTT were between 0 and −5°C and the aircraft was sampling in cloud within that temperature range. It was found that 3% of clouds sampled in situ with −5°C < CTT <0°C were mixed phase with a mean number concentration of 2.35 L−1for nonspherical particles with maximum diameters >100 μm and 1.13 L−1for nonspherical particles with maximum diameters >200 μm.more » « less
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null (Ed.)Abstract Weather and climate models are challenged by uncertainties and biases in simulating Southern Ocean (SO) radiative fluxes that trace to a poor understanding of cloud, aerosol, precipitation and radiative processes, and their interactions. Projects between 2016 and 2018 used in-situ probes, radar, lidar and other instruments to make comprehensive measurements of thermodynamics, surface radiation, cloud, precipitation, aerosol, cloud condensation nuclei (CCN) and ice nucleating particles over the SO cold waters, and in ubiquitous liquid and mixed-phase cloudsnucleating particles over the SO cold waters, and in ubiquitous liquid and mixed-phase clouds common to this pristine environment. Data including soundings were collected from the NSF/NCAR G-V aircraft flying north-south gradients south of Tasmania, at Macquarie Island, and on the RV Investigator and RSV Aurora Australis. Synergistically these data characterize boundary layer and free troposphere environmental properties, and represent the most comprehensive data of this type available south of the oceanic polar front, in the cold sector of SO cyclones, and across seasons. Results show a largely pristine environments with numerous small and few large aerosols above cloud, suggesting new particle formation and limited long-range transport from continents, high variability in CCN and cloud droplet concentrations, and ubiquitous supercooled water in thin, multi-layered clouds, often with small-scale generating cells near cloud top. These observations demonstrate how cloud properties depend on aerosols while highlighting the importance of confirmed low clouds were responsible for radiation biases. The combination of models and observations is examining how aerosols and meteorology couple to control SO water and energy budgets.more » « less
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Cloud phase and relative humidity (RH) distributions at −67° to 0°C over the Southern Ocean during austral summer are compared between in situ airborne observations and global climate simulations. A scale-aware comparison is conducted using horizontally averaged observations from 0.1 to 50 km. Cloud phase frequencies, RH distributions, and liquid mass fraction are found to be less affected by horizontal resolutions than liquid and ice water content (LWC and IWC, respectively), liquid and ice number concentrations (Ncliqand Ncice, respectively), and ice supersaturation (ISS) frequency. At −10° to 0°C, observations show 27%–34% and 17%–37% of liquid and mixed phases, while simulations show 60%–70% and 3%–4%, respectively. Simulations overestimate (underestimate) LWC and Ncliqin liquid (mixed) phase, overestimate Ncicein mixed phase, underestimate IWC in ice and mixed phases, and underestimate (overestimate) liquid mass fraction below (above) −5°C, indicating that observational constraints are needed for different cloud phases. RH frequently occurs at liquid saturation in liquid and mixed phases for all datasets, yet the observed RH in ice phase can deviate from liquid saturation by up to 20%–40% at −20° to 0°C, indicating that the model assumption of liquid saturation for coexisting ice and liquid is inaccurate for low liquid mass fractions (<0.1). Simulations lack RH variability for partial cloud fractions (0.1–0.9) and underestimate (overestimate) ISS frequency for cloud fraction <0.1 (≥0.6), implying that improving RH subgrid-scale parameterizations may be a viable path to account for small-scale processes that affect RH and cloud phase heterogeneities. Two sets of simulations (nudged and free-running) show very similar results (except for ISS frequency) regardless of sample sizes, corroborating the statistical robustness of the model–observation comparisons.more » « less
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Abstract Maritime boundary‐layer clouds over the Southern Ocean (SO) have a large shortwave radiative effect. Yet, climate models have difficulties in representing these clouds and, especially, their phase in this observationally sparse region. This study aims to increase the knowledge of SO cloud phase by presenting in‐situ cloud microphysical observations from the Southern Ocean Clouds, Radiation, Aerosol, Transport Experimental Study (SOCRATES). We investigate the occurrence of ice in summertime marine stratocumulus and cumulus clouds in the temperature range between 6 and −25°C. Our observations show that in ice‐containing clouds, maximum ice number concentrations of up to several hundreds per liter were found. The observed ice crystal concentrations were on average one to two orders of magnitude higher than the simultaneously measured ice nucleating particle (INP) concentrations in the temperature range below −10°C and up to five orders of magnitude higher than estimated INP concentrations in the temperature range above −10°C. These results highlight the importance of secondary ice production (SIP) in SO summertime marine boundary‐layer clouds. Evidence for rime splintering was found in the Hallett‐Mossop (HM) temperature range but the exact SIP mechanism active at lower temperatures remains unclear. Finally, instrument simulators were used to assess simulated co‐located cloud ice concentrations and the role of modeled HM rime‐splintering. We found that CAM6 is deficient in simulating number concentrations across the HM temperature range with little sensitivity to the model HM process, which is inconsistent with the aforementioned observational evidence of highly active SIP processes in SO low‐level clouds.more » « less
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